Are we just waiting for an upgraded version of this: http://www.cdtool.pwp.blueyonder.co.uk/downloads.htm?
Has all the pieces... but no offset correction - but that can be done with another shifting tool right?
Rambling below:
It looks like this is becoming a tug of war between intent and execution. Are we going for preserving the authors typos and paper type, or are we just retyping the words he wrote to meet modern digital conventions? Why preserve mastering errors? However, I would hate to see data thrown out that may eventually be of use.
Read everything, refine and correct later! Given enough time, there will be some tool to shift/skew/add/subtract/merge/fix if we just go for a format that captures as much as possible.