Something weird is going on on my side. In your logs it seems the protected sectors are handled correctly but on my side it tries to reread some of the sectors despite being already detected as protected.
gmipf@wks01:/media/Daten/DiscImageCreator_linux$ sudo ./DiscImageCreator_linux.out cd /dev/sr2 dumps/pc_cultures/dump.bin 0 /c2 1 /sf
AppVersion
x64, AnsiBuild, 20211101T132455
/c2 val2 was omitted. set [0]
/sf val was omitted. set [60]
CurrentDirectory
/media/Daten/DiscImageCreator_linux
WorkingPath
Argument: dumps/pc_cultures/dump.bin
FullPath: /media/Daten/DiscImageCreator_linux/dumps/pc_cultures/dump.bin
Drive: /
Directory: media/Daten/DiscImageCreator_linux/dumps/pc_cultures/
Filename: dump
Extension: .bin
StartTime: 2021-12-28T15:12:35+0100
Block Size: 4096
Flagment Size: 4096
All Block Num: 124606720
Free Block Num: 81407902
Available Block Num: 81248230
I Node Num: 0
Free I Node Num: 0
Available I Node Num: 0
File System ID: 3301985167766541070
Mount Flag: 4096
Max Filename Length: 255
CurrentDriveSize
Total: 510389125120 bytes
Used: 332792750080 bytes
--------------------------
Space: 177596375040 bytes
=> There is enough the disk space for dumping
This drive supports [OpCode: 0xd8, SubCode: 0]
This drive supports [OpCode: 0xd8, SubCode: 1]
This drive supports [OpCode: 0xd8, SubCode: 2]
This drive supports [OpCode: 0xd8, SubCode: 8]
Checking reading lead-out -> OK
Checking SubQ adr (Track) 16/16
Checking SubRtoW (Track) 16/16
Checking Pregap sync, msf, mode (LBA) -2448
Reading DirectoryRecord 4/ 4
Detected a protected file [CD.IDX]. LBA 32 to 97654
Set OpCode: 0xd8, SubCode: 8(Raw)
Checking SubQ ctl (Track) 16/16
Creating .scm (LBA) 85473/34 LBA[085499, 0x14dfb] Detected C2 error 566 bit
LBA[085500, 0x14dfc] Detected C2 error 982 bit
LBA[085501, 0x14dfd] Detected C2 error 1901 bit
LBA[085502, 0x14dfe] Detected C2 error 1193 bit
Creating .scm (LBA) 85503/346775 LBA[085511, 0x14e07] Detected C2 error 1146 bit
LBA[085513, 0x14e09] Detected C2 error 1194 bit
LBA[085515, 0x14e0b] Detected C2 error 1150 bit
LBA[085517, 0x14e0d] Detected C2 error 1168 bit
LBA[085519, 0x14e0f] Detected C2 error 1203 bit
LBA[085521, 0x14e11] Detected C2 error 1179 bit
LBA[085523, 0x14e13] Detected C2 error 1156 bit
LBA[085525, 0x14e15] Detected C2 error 1213 bit
LBA[085527, 0x14e17] Detected C2 error 1189 bit
LBA[085529, 0x14e19] Detected C2 error 1170 bit
LBA[085531, 0x14e1b] Detected C2 error 1198 bit
LBA[085533, 0x14e1d] Detected C2 error 1164 bit
Cre LBA[085535, 0x14e1f] Detected C2 error 1181 bit
LBA[085537, 0x14e21] Detected C2 error 610 bit
LBA[085538, 0x14e22] Detected C2 error 1553 bit
LBA[085539, 0x14e23] Detected C2 error 744 bit
LBA[085540, 0x14e24] Detected C2 error 688 bit
LBA[085541, 0x14e25] Detected C2 error 1004 bit
LBA[085542, 0x14e26] Detected C2 error 1835 bit
LBA[085543, 0x14e27] Detected C2 error 1678 bit
LBA[085544, 0x14e28] Detected C2 error 450 bit
LBA[085545, 0x14e29] Detected C2 error 905 bit
LBA[085546, 0x14e2a] Detected C2 error 1274 bit
LBA[085547, 0x14e2b] Detected C2 error 2080 bit
LBA[085548, 0x14e2c] Detected C2 error 632 bit
LBA[085549, 0x14e2d] Detected C2 error 772 bit
LBA[085550, 0x14e2e] Detected C2 error 1082 bit
LBA[085551, 0x14e2f] Detected C2 error 1885 bit
LBA[085552, 0x14e30] Detected C2 error 1595 bit
LBA[085553, 0x14e31] Detected C2 error 455 bit
LBA[085554, 0x14e32] Detected C2 error 927 bit
LBA[085555, 0x14e33] Detected C2 error 1356 bit
LBA[085556, 0x14e34] Detected C2 error 2072 bit
LBA[085557, 0x14e35] Detected C2 error 568 bit
LBA[085558, 0x14e36] Detected C2 error 777 bit
LBA[085559, 0x14e37] Detected C2 error 1077 bit
LBA[085560, 0x14e38] Detected C2 error 1882 bit
LBA[085561, 0x14e39] Detected C2 error 1408 bit
LBA[085562, 0x14e3a] Detected C2 error 422 bit
LBA[085563, 0x14e3b] Detected C2 error 907 bit
LBA[085564, 0x14e3c] Detected C2 error 1343 bit
Creatin LBA[085565, 0x14e3d] Detected C2 error 2011 bit
LBA[085566, 0x14e3e] Detected C2 error 492 bit
LBA[085567, 0x14e3f] Detected C2 error 738 bit
LBA[085568, 0x14e40] Detected C2 error 1432 bit
LBA[085569, 0x14e41] Detected C2 error 1543 bit
LBA[085570, 0x14e42] Detected C2 error 2005 bit
LBA[085571, 0x14e43] Detected C2 error 505 bit
LBA[085572, 0x14e44] Detected C2 error 887 bit
LBA[085573, 0x14e45] Detected C2 error 1172 bit
LBA[085574, 0x14e46] Detected C2 error 1958 bit
LBA[085575, 0x14e47] Detected C2 error 1145 bit
LBA[085576, 0x14e48] Detected C2 error 486 bit
LBA[085577, 0x14e49] Detected C2 error 959 bit
LBA[085578, 0x14e4a] Detected C2 error 1504 bit
LBA[085579, 0x14e4b] Detected C2 error 1959 bit
LBA[085580, 0x14e4c] Detected C2 error 468 bit
LBA[085581, 0x14e4d] Detected C2 error 751 bit
LBA[085582, 0x14e4e] Detected C2 error 1447 bit
LBA[085583, 0x14e4f] Detected C2 error 1632 bit
LBA[085584, 0x14e50] Detected C2 error 1894 bit
LBA[085585, 0x14e51] Detected C2 error 447 bit
LBA[085586, 0x14e52] Detected C2 error 778 bit
LBA[085587, 0x14e53] Detected C2 error 1529 bit
LBA[085588, 0x14e54] Detected C2 error 1754 bit
LBA[085589, 0x14e55] Detected C2 error 1646 bit
LBA[085590, 0x14e56] Detected C2 error 403 bit
LBA[085591, 0x14e57] Detected C2 error 873 bit
LBA[085592, 0x14e58] Detected C2 error 1319 bit
LBA[085593, 0x14e59] Detected C2 error 2056 bit
LBA[085594, 0x14e5a] Detected C2 error 598 bit
Creating .s LBA[085595, 0x14e5b] Detected C2 error 818 bit
LBA[085596, 0x14e5c] Detected C2 error 1489 bit
LBA[085597, 0x14e5d] Detected C2 error 1672 bit
LBA[085598, 0x14e5e] Detected C2 error 2081 bit
LBA[085599, 0x14e5f] Detected C2 error 594 bit
LBA[085600, 0x14e60] Detected C2 error 849 bit
LBA[085601, 0x14e61] Detected C2 error 1510 bit
LBA[085602, 0x14e62] Detected C2 error 1705 bit
LBA[085603, 0x14e63] Detected C2 error 1979 bit
LBA[085604, 0x14e64] Detected C2 error 502 bit
LBA[085605, 0x14e65] Detected C2 error 806 bit
LBA[085606, 0x14e66] Detected C2 error 1183 bit
LBA[085607, 0x14e67] Detected C2 error 1973 bit
LBA[085608, 0x14e68] Detected C2 error 1311 bit
LBA[085609, 0x14e69] Detected C2 error 492 bit
LBA[085610, 0x14e6a] Detected C2 error 946 bit
LBA[085611, 0x14e6b] Detected C2 error 1565 bit
LBA[085612, 0x14e6c] Detected C2 error 1914 bit
LBA[085613, 0x14e6d] Detected C2 error 493 bit
LBA[085614, 0x14e6e] Detected C2 error 799 bit
LBA[085615, 0x14e6f] Detected C2 error 1443 bit
LBA[085616, 0x14e70] Detected C2 error 1499 bit
LBA[085617, 0x14e71] Detected C2 error 2073 bit
LBA[085618, 0x14e72] Detected C2 error 596 bit
LBA[085619, 0x14e73] Detected C2 error 815 bit
LBA[085620, 0x14e74] Detected C2 error 1128 bit
LBA[085621, 0x14e75] Detected C2 error 1914 bit
LBA[085622, 0x14e76] Detected C2 error 1241 bit
LBA[085623, 0x14e77] Detected C2 error 409 bit
LBA[085624, 0x14e78] Detected C2 error 874 bit
Creating .scm ( LBA[085625, 0x14e79] Detected C2 error 1439 bit
LBA[085626, 0x14e7a] Detected C2 error 2020 bit
LBA[085627, 0x14e7b] Detected C2 error 508 bit
LBA[085628, 0x14e7c] Detected C2 error 762 bit
LBA[085629, 0x14e7d] Detected C2 error 1353 bit
LBA[085630, 0x14e7e] Detected C2 error 2058 bit
LBA[085631, 0x14e7f] Detected C2 error 1216 bit
LBA[085632, 0x14e80] Detected C2 error 468 bit
LBA[085633, 0x14e81] Detected C2 error 936 bit
LBA[085634, 0x14e82] Detected C2 error 1500 bit
LBA[085635, 0x14e83] Detected C2 error 2074 bit
LBA[085636, 0x14e84] Detected C2 error 585 bit
LBA[085637, 0x14e85] Detected C2 error 786 bit
LBA[085638, 0x14e86] Detected C2 error 1455 bit
LBA[085639, 0x14e87] Detected C2 error 1618 bit
LBA[085640, 0x14e88] Detected C2 error 1942 bit
LBA[085641, 0x14e89] Detected C2 error 485 bit
LBA[085642, 0x14e8a] Detected C2 error 867 bit
LBA[085643, 0x14e8b] Detected C2 error 1770 bit
LBA[085644, 0x14e8c] Detected C2 error 1725 bit
LBA[085645, 0x14e8d] Detected C2 error 435 bit
LBA[085646, 0x14e8e] Detected C2 error 861 bit
LBA[085647, 0x14e8f] Detected C2 error 1242 bit
LBA[085648, 0x14e90] Detected C2 error 2023 bit
LBA[085649, 0x14e91] Detected C2 error 661 bit
LBA[085650, 0x14e92] Detected C2 error 662 bit
LBA[085651, 0x14e93] Detected C2 error 1348 bit
LBA[085652, 0x14e94] Detected C2 error 1615 bit
LBA[085653, 0x14e95] Detected C2 error 2068 bit
LBA[085654, 0x14e96] Detected C2 error 613 bit
Creating .scm (LBA) LBA[085655, 0x14e97] Detected C2 error 679 bit
LBA[085656, 0x14e98] Detected C2 error 1046 bit
LBA[085657, 0x14e99] Detected C2 error 1875 bit
LBA[085658, 0x14e9a] Detected C2 error 1595 bit
LBA[085659, 0x14e9b] Detected C2 error 444 bit
LBA[085660, 0x14e9c] Detected C2 error 1026 bit
LBA[085661, 0x14e9d] Detected C2 error 1394 bit
LBA[085662, 0x14e9e] Detected C2 error 2129 bit
LBA[085663, 0x14e9f] Detected C2 error 767 bit
LBA[085664, 0x14ea0] Detected C2 error 693 bit
LBA[085665, 0x14ea1] Detected C2 error 1393 bit
LBA[085666, 0x14ea2] Detected C2 error 1614 bit
LBA[085667, 0x14ea3] Detected C2 error 2043 bit
LBA[085668, 0x14ea4] Detected C2 error 526 bit
LBA[085669, 0x14ea5] Detected C2 error 908 bit
LBA[085670, 0x14ea6] Detected C2 error 1112 bit
LBA[085671, 0x14ea7] Detected C2 error 1874 bit
LBA[085672, 0x14ea8] Detected C2 error 1384 bit
LBA[085673, 0x14ea9] Detected C2 error 451 bit
LBA[085674, 0x14eaa] Detected C2 error 951 bit
LBA[085675, 0x14eab] Detected C2 error 1374 bit
LBA[085676, 0x14eac] Detected C2 error 2039 bit
LBA[085677, 0x14ead] Detected C2 error 822 bit
LBA[085678, 0x14eae] Detected C2 error 1300 bit
LBA[085679, 0x14eaf] Detected C2 error 2051 bit
LBA[085680, 0x14eb0] Detected C2 error 747 bit
LBA[085681, 0x14eb1] Detected C2 error 587 bit
LBA[085682, 0x14eb2] Detected C2 error 962 bit
LBA[085683, 0x14eb3] Detected C2 error 1764 bit
LBA[085684, 0x14eb4] Detected C2 error 1755 bit
Creating .scm (LBA) 85 LBA[085685, 0x14eb5] Detected C2 error 430 bit
LBA[085686, 0x14eb6] Detected C2 error 880 bit
LBA[085687, 0x14eb7] Detected C2 error 1300 bit
LBA[085688, 0x14eb8] Detected C2 error 2074 bit
LBA[085689, 0x14eb9] Detected C2 error 819 bit
LBA[085690, 0x14eba] Detected C2 error 690 bit
LBA[085691, 0x14ebb] Detected C2 error 1003 bit
LBA[085692, 0x14ebc] Detected C2 error 1763 bit
LBA[085693, 0x14ebd] Detected C2 error 1798 bit
LBA[085694, 0x14ebe] Detected C2 error 500 bit
LBA[085695, 0x14ebf] Detected C2 error 987 bit
LBA[085696, 0x14ec0] Detected C2 error 1557 bit
LBA[085697, 0x14ec1] Detected C2 error 1774 bit
LBA[085698, 0x14ec2] Detected C2 error 1710 bit
LBA[085699, 0x14ec3] Detected C2 error 431 bit
LBA[085700, 0x14ec4] Detected C2 error 848 bit
LBA[085701, 0x14ec5] Detected C2 error 1251 bit
LBA[085702, 0x14ec6] Detected C2 error 2051 bit
LBA[085703, 0x14ec7] Detected C2 error 676 bit
Creating .scm (LBA) 346775/346775
Need to reread sector: 85703 rereading times: 1/ 1
Done. See _c2Error.txt
Copying .scm to .img
Descrambling data sector of img: 98103/ 98103
Exec /media/Daten/DiscImageCreator_linux/./EccEdc_linux.out check "/media/Daten/DiscImageCreator_linux/dumps/pc_cultures/dump.img"
FILE: /media/Daten/DiscImageCreator_linux/dumps/pc_cultures/dump.img
Checking sectors: 346774/346774
[ERROR] Number of sector(s) where bad MSF: 1216
[ERROR] Number of sector(s) where user data doesn't match the expected ECC/EDC: 18
[ERROR] Number of sector(s) where sync(0x00 - 0x0c) is invalid: 256
[ERROR] Number of sector(s) where sync(0x00 - 0x0c) is zero: 18
Total errors: 1508
Total warnings: 0
Creating cue and ccd (Track) 16/16
Creating bin (Track) 16/16
Hashing: dump.scm
Hashing: dump.img
Hashing: dump (Track 01).bin
Hashing: dump (Track 02).bin
Hashing: dump (Track 03).bin
Hashing: dump (Track 04).bin
Hashing: dump (Track 05).bin
Hashing: dump (Track 06).bin
Hashing: dump (Track 07).bin
Hashing: dump (Track 08).bin
Hashing: dump (Track 09).bin
Hashing: dump (Track 10).bin
Hashing: dump (Track 11).bin
Hashing: dump (Track 12).bin
Hashing: dump (Track 13).bin
Hashing: dump (Track 14).bin
Hashing: dump (Track 15).bin
Hashing: dump (Track 16).bin
EndTime: 2021-12-28T15:42:15+0100
gmipf@wks01:/media/Daten/DiscImageCreator_linux$ sudo chown -R gmipf:gmipf dumps/
[sudo] password for gmipf:
gmipf@wks01:/media/Daten/DiscImageCreator_linux$